The original chapter 1 "Unbirth" which focused on Jack the Ripper. Though elements from this chapter exists in the official Fate/Apocrypha story, it is not part of the main light novel's plot. 

This chapter was only published in the 7th volume of the Type-Moon Ace magazine.

The setting of Fate/Apocrypha is a parallel world to Fate/stay night where the Greater Grail was removed from Fuyuki after the Third Holy Grail War and disappeared for many years. Around the 2000s, around the same time as the Fifth Holy Grail War would have happened, the group that plundered the Grail, Yggdmillennia, openly declares their secession from the Mage's Association and that they are in possession of the Grail. The Association dispatches fifty magi to retrieve it, but all but one are instantly slaughtered by Lancer of Black. The one remaining manages to activate the reserve system of the Greater Grail, allowing for the summoning of fourteen Servants in total. 

This marks the start of the Great Holy Grail War in Trifas, featuring two different factions, the Black Faction, whose members are part of Yggdramillennia, and the Red Faction, whose members were sent by the Mage's Association with the exception of one from the Church. The Grail itself also summons Ruler to act as a mediator of the Holy Grail War.

The story takes place in an ordinary Japanese town, Fuyuki City. Hidden from society, there has been a deadly war going on in this town. Seven sorcerers known as "Masters" summon a powerful familiar called "Servants" and they all fight each other till the last one. The last one is said to attain the Holy Grail which will grant them a wish. Only a few knows when this War started and what the Holy Grail is, but the war was about to begin again this year. 
The main character is Emiya Shirou, who lost his parents in a fire and was adopted by a man who called himself a sorcerer. Admiring his step father, he has been training himself to be a sorcerer. However, he had no talent and he could barely use one type of sorcery. His step father has already passed away, and today he's a sorcerer without any skills or knowledge. He is involved in the War of the Holy Grail when he accidentally summons Saber, who is said to be the strongest servant of all... 
Note: Includes five extra chapters.

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